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Merel Rijnsburger
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Metabolism |
Neuro-inflammation |
(Immune) biomarkers Adaptive immunity Biomarker detection Clinical outcomes Immune (dys)function Inflammation Innate immunity Leukocyte migration Signal transduction |
Brain Epithelial cells Fibroblasts Macrophages Plasma adipose tissue, T cells, microglia, astrocytes |
Animal studies Cellular and molecular biochemistry Confocal microscopy DNA / RNA FISH Imaging and image analysis Immunofloresence Immunohistochemistry Proteomics Single cell sequencing Transcriptomics RNAscope |
MCBI |
VUmc |
Postdoc |
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Jurriaan Romano
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Gastroenterology |
Colorectal cancer Gastric cancer Peritoneally metastasized gastro-intestinal cancers. |
(Immune) biomarkers Adaptive immunity Cancer microenvironment Immune (dys)function Immune therapy/immunotherapy Innate immunity |
Colon Macrophages Rectum Stomach Stromal cells T cells: Treg, Th17, Th1, Th2 |
Bioinformatics CyTOF Flow cytometry Multi-omics analysis Observational/epidemiology studies Single cell sequencing Transcriptomics Spatial in-situ transcriptomics |
LEXOR |
VUmc |
PhD candidate |
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Sagnik Roy
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Gastroenterology |
Cancer Gastric cancer Oesophageal cancer cancer cachexia |
AI Biomarker detection Clinical outcomes Fecal transplantation Microbiome Public health Screening |
Duodenum Oesophagus Plasma Rectum |
Bioinformatics Computational models Metabolomics Metagenomics Microbial 16S sequencing Multi-omics analysis Next-generation sequencing Proteomics Transcriptomics |
Vascular Medicine |
AMC UvA |
PhD candidate |
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Tijn Rozemuller
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Metabolism |
Not applicable Primary hyperoxaluria |
Clinical outcomes Metabolomics |
Kidney Liver |
Cellular and molecular biochemistry CRISPR/Cas technology GC-MS / GC-IMS LC-MS RNAi strategies |
Pediatric Nephrology |
AMC |
PhD candidate |
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Pascale Schafrat
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Gastroenterology |
Cancer Small intestinal adenocarcinoma |
Cancer genetics, genomics, clonal variation Clinical outcomes Quality of life |
Not applicable |
Next-generation sequencing Observational/epidemiology studies Questionnaires |
LEXOR & Medical Oncology |
AMC VUmc |
PhD candidate |
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Bauke Schomakers
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Metabolism |
Inborn errors of metabolism |
Lipid metabolism Metabolomics |
Fibroblasts |
Bioinformatics LC-MS Mass Spectometry Multi-omics analysis Proteomics I use various high res MS machines, to do integrated omics using a single sample prep (metics/lipids/proteomics) |
Lab GMZ |
AMC |
PhD candidate |
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Ayano Shiba
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Metabolism |
Diabetes Metabolic syndrome Obesity |
Biomarker detection Gene regulation Lipid metabolism Circadian regulation |
Brain Gonads Liver Plasma Skeletal muscle |
Animal studies Confocal microscopy Imaging and image analysis Immunofloresence Immunohistochemistry ELISA, qPCR etc... |
Endocrinology and Metabolism |
AMC Netherlands institute for Neuroscience |
PhD candidate |
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Helga Simon-Molas
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Metabolism |
Hematological diseases |
Adaptive immunity Cancer metabolism Cancer microenvironment Immune (dys)function Immune metabolism Immune therapy/immunotherapy Lipid metabolism Metabolomics |
B cells T cells: Treg, Th17, Th1, Th2 PBMC |
Cellular and molecular biochemistry Confocal microscopy Electron microscopy Immunofloresence Metabolomics Seahorse, metabolic assays, 13C tracing |
Dept. Experimental Immunology & Dept. Hematology |
AMC |
Postdoc |
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Florance Christiana Slooter
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Gastroenterology |
Oesophageal cancer Oesophageal dysplasia |
AI Endoscopy Screening |
Oesophagus Stomach |
AI Clinical trials/intervention studies Computational models Endoscopy Imagestream Imaging and image analysis |
MDL |
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PhD candidate |
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Esmée Smit
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Gastroenterology |
Hepatobiliairy cancer |
Cancer genetics, genomics, clonal variation Endoscopy |
Cholangiocytes Liver |
Clinical trials/intervention studies DNA methylation analysis Endoscopy Human Intervention Studies Next-generation sequencing Registry |
Gastroenterology |
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PhD candidate |
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